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DHPLC Publication List (sorted by categories)

The DHPLC publication list is also available sorted by publication year

small bullet The Method small bullet Single Nucleotide Extension Sequencing and DHPLC
small bullet Sensitivity and Specificity small bullet DNA/RNA Purification
small bullet Mutational Analysis of Candidate Genes small bullet Mass Spectrometry and DHPLC
small bullet BRCA1 & BRCA2 small bullet Quantitation of Gene Expression by DHPLC
small bullet Tuberous Sclerosis small bullet Related Papers
small bullet Mapping and Positional Cloning small bullet Miscellaneous
small bullet Reverse Genetics small bullet Molecular Fingerprinting of Microorganisms
small bullet Human Evolution, Y-Chromosome small bullet DNA Methylation Analysis
   

The references below are hyper-linked to their abstract via PubMed or, whenever possible, directly to the journal. (Access to journals may require membership or subscription).

Please, forward new citations for inclusion in this list to oefner#genome.stanford.edu

 
Miscellaneous
  1. Craig IW, McClay J, Plomin R, Freeman B. (2000) Chasing behaviour genes into the next millenium. TIBTECH, 18:22-26.

  2. Shinka T, Naroda T, Tamura T, Sasahara K, Nakahori Y. (2001) A rapid and simple method for sex identification by heteroduplex analysis, using denaturing high-performance liquid chromatography (DHPLC). J Hum Genet. ;46(5):263-6.

  3. Baumer A, Wiedemann U, Hergersberg M, Schinzel A. (2001) A novel MSP/DHPLC method for the investigation of the methylation status of imprinted genes enables the molecular detection of low cell mosaicisms. Hum Mutat. May;17(5):423-30

  4. Cox D, Boillot C, Canzian F. (2001) Data mining: Efficiency of using sequence databases for polymorphism discovery. Hum Mutat. Feb;17(2):141-50.

  5. Rickert A.M., Premstaller A., Gebhardt Ch., Oefner P.J. (2002) Genotyping of SNPs in a Polyploid Genome by Pyrosequencing™. BioTechniques 32:592-603.

  6. Cooksey RC, Morlock GP, Holloway BP, Limor J, and Hepburn M. (2002) Temperature-mediated heteroduplex analysis performed by using denaturing high-performance liquid chromatography to identify sequence polymorphisms in Mycobacterium tuberculosis complex organisms. J Clin Microbiol.; May (5);1610-1616.

  7. Dickman MJ, Conroy MJ, Grasby JA, Hornby DP. (2002) RNA footprinting analysis using ion pair reverse phase liquid chromatography. RNA Feb;8(2):247-251

  8. Dickman MJ, Matin MM, Hornby DP. (2002) High-throughput analysis of nucleic acid modification reactions using ion-pair reverse-phase high-performance liquid chromatography. Anal Biochem Feb 15;301(2):290-7

  9. Patel D, Tock MR, Frary E, Feng M, Pickering TJ, Grasby JA, Sayers JR. (2002). A conserved tyrosine residue aids ternary complex formation, but not catalysis, in phage T5 flap endonuclease.
    J. Mol. Biol. 320, 1025-1035.

  10. Kaur M, Makrigiorgos GM. (2003) Novel amplification of DNA in a hairpin structure: towards a radical elimination of PCR errors from amplified DNA. Nucleic Acids Res. Mar 15;31(6):E26.

  11. Danilevskaya ON, Hermon P, Hantke S, Muszynski MG, Kollipara K, Ananiev EV. (2003). Duplicated fie Genes in Maize: Expression Pattern and Imprinting Suggest Distinct Functions.
    Plant Cell 15, 425-438.

  12. Mabic S, Kano I. (2003). Impact of purified water quality on molecular biology experiments. Clin Chem Lab Med 41:486-91.

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