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DHPLC Publication List (sorted by categories)

The DHPLC publication list is also available sorted by publication year
small bullet The Method small bullet Single Nucleotide Extension Sequencing and DHPLC
small bullet Sensitivity and Specificity small bullet DNA/RNA Purification
small bullet Mutational Analysis of Candidate Genes small bullet Mass Spectrometry and DHPLC
small bullet BRCA1 & BRCA2 small bullet Quantitation of Gene Expression by DHPLC
small bullet Tuberous Sclerosis small bullet Related Papers
small bullet Mapping and Positional Cloning small bullet Miscellaneous
small bullet Reverse Genetics small bullet Molecular Fingerprinting of Microorganisms
small bullet Human Evolution, Y-Chromosome small bullet DNA Methylation Analysis
   

The references below are hyper-linked to their abstract via PubMed or, whenever possible, directly to the journal. (Access to journals may require membership or subscription).

Please, forward new citations for inclusion in this list to oefner#genome.stanford.edu

 
DNA/RNA Purification

  1. Huber, C., Oefner, P. and Bonn, G. (1995) Rapid and accurate sizing of DNA fragments by ion-pair chromatography on alkylated nonporous poly(styrene-divinylbenzene) particles. Anal. Chem. 67:578-585.

  2. Marino, M.A., Devaney, J.M., Smith, J.K., Girard, J.E. (1998) Sequencing using capillary electrophoresis of short tandem repeat alleles separated and purified by high performance liquid chromatography. Electrophoresis 19(1):108-118.

  3. Hecker, K.H., Turpie, B., Kuklin, A. (1999) Optimization of cloning efficacy by pre-cloning DNA fragment analysis. BioTechniques 26(2):216-222.

  4. Kuklin, A., Munson, K., Taylor, P., and Gjerde, D. (1999). Isolation and analysis of amplified cDNA fragments during detection of unknown polymorphisms with temperature modulated heteroduplex chromatography. Mol. Biotechnol. 11, 257-261.

  5. Shaw-Bruha, C.M., Lamb, K.A. (2000) Ion pair-reversed phase HPLC approach facilitates subcloning of PCR products and screening of recombinant colonies. BioTechniques 28(4):794-797.

  6. Dickman, M., Hornby, D.P. (2000) Isolation of single-stranded DNA using denaturing DNA chromatography. Anal. Biochem. 284(1):164-167.

  7. Georgopoulos, D.E., Leibowitz, M.J. (2000) Use of high-performance liquid chromatographic fractionation of large RNA molecules in the assay of group I intron ribozyme activity. J. Chromatogr. A. 868(1):109-114.

  8. Hecker, K.H., Green, S.M., Kobayashi, K. (2000) Analysis and purification of nucleic acids by ion-pair reversed-phase high-performance liquid chromatography. J. Biochem. Biophys. Methods 46(1-2):83-93.

  9. Azarani, A., and Hecker, K.H. (2001). RNA analysis by ion-pair reversed-phase high performance liquid chromatography. Nucleic Acids Res. 29, e7.

  10. Tock MR, Frary E, Sayers JR, Grasby JA. (2003). Dynamic evidence for metal ion catalysis in the reaction mediated by a flap endonuclease. EMBO J. 22, 995-1004.
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