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DHPLC Publication List (sorted by categories)

The DHPLC publication list is also available sorted by publication year
small bullet The Method small bullet Single Nucleotide Extension Sequencing and DHPLC
small bullet Sensitivity and Specificity small bullet DNA/RNA Purification
small bullet Mutational Analysis of Candidate Genes small bullet Mass Spectrometry and DHPLC
small bullet BRCA1 & BRCA2 small bullet Quantitation of Gene Expression by DHPLC
small bullet Tuberous Sclerosis small bullet Related Papers
small bullet Mapping and Positional Cloning small bullet Miscellaneous
small bullet Reverse Genetics small bullet Molecular Fingerprinting of Microorganisms
small bullet Human Evolution, Y-Chromosome small bullet DNA Methylation Analysis
   

The references below are hyper-linked to their abstract via PubMed or, whenever possible, directly to the journal. (Access to journals may require membership or subscription).

Please, forward new citations for inclusion in this list to oefner#genome.stanford.edu

 
DNA Methylation Analysis

  1. Baumer A, Wiedemann U, Hergersberg M, Schinzel A. (2001) A novel MSP/DHPLC method for the investigation of the methylation status of imprinted genes enables the molecular detection of low cell mosaicisms. Hum. Mutat. 17(5):423-430

  2. Deng D, Deng G, Lu Y. (2001) [Analysis of the methylation in CpG island by denaturing high-performance liquid chromatography] Zhonghua Yi Xue Za Zhi. 2001 Feb 10;81(3):158-61. Chinese.

  3. Baumer A. (2002) Analysis of the methylation status of imprinted genes based on methylation-specific polymerase chain reaction combined with denaturing high-performance liquid chromatography. Methods. Jun;27(2):139-43.

  4. Deng D, Deng G, Smith MF, Zhou J, Xin H, Powell SM, Lu Y. (2002) Simultaneous detection of CpG methylation and single nucleotide polymorphism by denaturing high performance liquid chromatography. Nucleic Acids Res. Feb 1;30(3):E13-3.

  5. El-Maarri O, Herbiniaux U, Walter J, Oldenburg J. (2002) A rapid, quantitative, non-radioactive bisulfite-SNuPE- IP RP HPLC assay for methylation analysis at specific CpG sites. Nucleic Acids Res. 2002 Mar 15;30(6):e25.

  6. Matin MM, Baumer A, Hornby DP. (2002). An analytical method for the detection of methylation differences at specific chromosomal loci using primer extension and ion pair reverse phase HPLC. Hum. Mutat. 20, 305-311.

  7. Deng D, El-Rifai W, Ji J, Zhu B, Trampont P, Li J, Smith MF, Powel SM. (2003) Hypermethylation of metallothionein-3 CpG island in gastric carcinoma. Carcinogenesis.Jan;24(1):25-9.

  8. Deng DJ, Zhou J, Zhu BD, Ji JF, Harper JC, Powell SM. (2003) Silencing-specific methylation and single nucleotide polymorphism of hMLH1 promoter in gastric carcinomas. World J Gastroenterol. Jan;9(1):26-9.

  9. Couvert P, Poirier K, Carrie A, Chalas C, Jouannet P, Beldjord C, Bienvenu T, Chelly J, Kerjean A. (2003) DHPLC-based method for DNA methylation analysis of differential methylated regions from imprinted genes. Biotechniques. Feb;34(2):356-62.

  10. Deng D, El-Rifai W, Ji J, Zhu B, Trampont P, Li J, Smith MF, Powel SM. (2003). Hypermethylation of metallothionein-3 CpG island in gastric carcinoma. Carcinogenesis 24, 25-29.

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